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Table 1 Primers and probe

From: Development and evaluation of a broadly reactive reverse transcription recombinase polymerase amplification assay for rapid detection of murine norovirus

Name

Sequence

Amplicon length

MNV-F

ATGCATGGTGAAAAGTACTAT

788 bp

MNV-R

TAGAAAGAAGGCGACCAGAGA

f1

CAGTCTTTGTGAATGAGGATGAGTGATG

189 bp

r1

AAAATTTTGGAAGATCCAGGGGTCAATTT

f2

CAAATCAACCAAATTGACCCCTGGATCTT

151 bp

r2

ACCTCCATGTTCCCAACCCAGCCGGTGTACAT

f3

CAAAATTTTGTCCAGTGCCCCCTTGGTGAGTT

135 bp

r3

AGGACCAGCTGAACCTCCATGTTCCCAACCCA

f4

CACGCCACCGGTCTGTTCTGCGCTGGGTGC

154 bp

r4

AAGGAACAAGATCCTGGCCGCTGGCTTC

f5

TTCCAAAATTTTGTCCAGTGCCCCCTTGGT

131 bp

r5

GCTGAACCTCCATGTTCCCAACCCAGCCGGTG

f6

TTCAGCTGGTCCTCGCCGGCAATGCCTTTA

141 bp

r6

CCAGGGTGCGCACATCACACATGACATGTG

probe

TCGAAACACCCCAGGCGAAATATTGTTTGA(BHQ)(THF)(FAM)GGCCCTCGGGCCAGG

  1. BHQ1-dT dT-fluorophore, THF tetrahydrofuran, FAM-dT dT-quencher group