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Table 1 Protein expression differences among experimental groups at different time points (30 min, 1 h, 4 h and 48 h)

From: Changes in serum proteins after endotoxin administration in healthy and choline-treated calves

LPS_Choline

P02081; Hemoglobin fetal subunit beta/1.52

Q9QAQ7; Non structural protein of 4 9 kDa/3.42

P02676; Fibrinogen beta chain/3.83

A2I7N1; Serpin A3 5/1.44

Q3ZC07*; Actin alpha cardiac muscle 1/15.21

Q32L76; Serum amyloid A 4 protein/1.70

A2I7N3; Serpin A3 7/1.44

Q3ZC07*; Actin alpha cardiac muscle 1/187.33

P0CH28*; Polyubiquitin C/1.59

P12799; Fibrinogen gamma B chain/8.44

Q2M2T2; U-p-C19orf71-h/2.17

P02676; Fibrinogen beta chain/64.53

A2I7N1; Serpin A3 5/1.44

Q9TTK6; Membrane primary amine oxidase/Infinity

P01966; Hemoglobin subunit alpha/1.50

P19034; Apolipoprotein C II/2.82

Q9MYP6; beta hydroxysteroid dehydrogenase 14/26.44

Q1JQ97; Bardet Biedl syndrome 4 protein homolog/2.30

Q9TTK6; Membrane primary amine oxidase/11.79

P81644; Apolipoprotein A II/1.45

P19035; Apolipoprotein C III/2.34

Q32L76; Serum amyloid A 4 protein/2.20

Q5E9E3; Complement C1q subcomponent subunit A/3.01

P34955; Alpha 1 antiproteinase/1.60

P28800; Alpha 2 antiplasmin/1.43

P80012; von Willebrand factor Fragment/2.98

Q9TTE1; Serpin A3 1/2.09

Q80E01; Glutaredoxin 1/2.21

Q3SZJ0; Argininosuccinate lyase/1.81

Q17QL1; Glucosamine 6 phosphate isomerase 2/2.96

Q3T0Z5; Leukocyte receptor cluster m-1-h/2.22

Q9TTE1; Serpin A3 1/1.74

Q9TTK6; Membrane primary amine oxidase/64.58

A2I7N0; Serpin A3 4/1.47

P41361; Antithrombin III/2.67

P00735; Prothrombin/2.287

P12799; Fibrinogen gamma B chain/5.92

 

LPS

P17697; Clusterin/1.43

Q0V898; Negative elongation factor E/1.68

Q9TTK6; Membrane primary amine oxidase/7.17

A6QPQ2; Serpin A3 8/1.67

O46406; Primary amine oxidase lung isozyme/3.74

P01044; Kininogen 1/2.13

A7E3W2; Galectin 3 binding protein/13.09

P41356; Fusion glycoprotein F0/1.82

O62830-2; Isoform Beta 2 of Protein phosphatase 1B/6.78

Q3T132; Ragulator complex protein LAMTOR2/189.56

Q3SZJ0; Argininosuccinate lyase/9.22

Q9QAQ7; Bovine coronavirus strain OK 0514 GN 4a/4.93

Q0V898; Negative elongation factor E/10.86

Q28901;6-p-2-k-f-2-6-b-f/Infinity

A2I7N2; Serpin A3 6/1.64

P81644; Apolipoprotein A II/1.62

P19035; Apolipoprotein C III/2.80

Q5E9E3; Complement C1q subcomponent subunit A/2.66

Q28901; 6-p-2-k-f-2-6-b-f/infinity

P01966; Hemoglobin subunit alpha/1.81

P02081; Hemoglobin fetal subunit beta/1.55

P80109; P-g-s-p-d/1.50

Q5E9F5; Transgelin 2/2.90

P22226; Cathelicidin 1/13.17

Q7SIH1; Alpha 2 macroglobulin/1.41

A2I7M9; Serpin A3 2/9.68

P00924; ENO1 YEAST Enolase 1/1.46

Q3MHN5; Vitamin D binding protein/1.67

Q3ZC07*; Actin alpha cardiac muscle 1/25.52

P80109; Phosphatidylinositol glycan specific phospholipase D/3.11

O02659; Mannose binding protein C/5.76

P0CH28*; Polyubiquitin C/4.09

A8YXX7; Trefoil factor 3/4.93

Q2TBS3; Uncharacterized protein C20orf79 homolog/4.76

Q96629; Adenain/2.23

P19034; Apolipoprotein C II/4.21

Q1JP73; UPF0553 protein C9orf64 homolog/12.57

 

Q9TTK6-2; Isoform 2 of Membrane primary amine oxidase/2.30

Q1JP73; UPF0553 protein C9orf64 homolog/1.95

Q56K14; 60S acidic ribosomal protein P1/Infinity

Q3SZV7; Hemopexin/2.10

Q1JQ97; Bardet Biedl syndrome 4 protein homolog/1.48

Q56K14;60S acidic ribosomal protein P1/Infinity

Q96629; Adenain/1.74

Q2KIT0; Protein HP 20 homolog/1.93

Q5E9F5; Transgelin 2/Infinity

P62803; Histone H4/11.67

Choline

O46406; Primary amine oxidase lung isozyme/1.74

Q28901; 6-p-2-k-f-2-6-b-f/Infinity

Q2M2T2; Uncharacterized protein C19orf71/1.78

A2I7N3; Serpin A3 7/1.56

Q17QL1; Glucosamine 6 phosphate isomerase 2/1.48

 

A5PJC4; Ubiquitin ISG15 c. e. E2 L6/1.45

Q80E01; Glutaredoxin 1/1.40

Q0VCI2; Syntaxin 19/3.81

Q0V898; Negative elongation factor E/2.4

Q05204; Lysosome associated membrane glycoprotein 1/4.03

Q56K14; 60S acidic ribosomal protein P1/8968.4

P34955; Alpha 1 antiproteinase/1.47

A2I7N2; Serpin A3 6/1.72

Q3SZJ0; Argininosuccinate lyase/1.41

Q17QL1; Glucosamine 6 phosphate isomerase 2/8.44

Control

 

P80012; von Willebrand factor Fragment/2.08

A2I7N0; Serpin A3 4/1.60

P21752; Thymosin beta 10/1.45

Q3SZK0; Solute carrier family 25 member 34/1.72

Q2TBS3; Uncharacterized protein C20orf79/2.01

Q3T132; Ragulator complex protein LAMTOR2/2.04

Q05204; Lysosome associated membrane glycoprotein 1/2.34

 

P01044-2*; Isoform LMW of Kininogen 1/2.87

 

Q9TTK6-2; Isoform 2 of Membrane primary amine oxidase/2.82

 

Q80E01; Glutaredoxin 1/3.37

 

Q58CQ9; Pantetheinase/1.58

Q05204; Lysosome associated membrane glycoprotein 1/10.89

Q3MHN5; Vitamin D binding protein/1.48

 
  

Q96629; Adenain/1.69

Q2KIU3; Protein HP 25 homolog 2/1.70

P56652; Inter alpha trypsin inhibitor heavy chain H3/1.58

 

P02081; Hemoglobin fetal subunit beta/1.72

Q29443; Serotransferrin/1.57

P01044-2*; Isoform LMW of Kininogen 1/1.62

Q32PJ2; Apolipoprotein A IV/1.45

Q58CQ9; Pantetheinase/1.84

A2I7N2; Serpin A3 6/4.57

P21752; Thymosin beta 10/1.46

Q2KJF1; Alpha 1B glycoprotein/1.46

Q9MYP6;17 beta hydroxysteroid dehydrogenase 14/2.24

P01966; Hemoglobin subunit alpha/1.63

P02070; Hemoglobin subunit beta/1.98

A7YY73; Transcription factor MafF/5.00

E1BF81; Corticosteroid binding globulin/5.27

Control

Choline

LPS

LPS_Choline

  1. This table shows the identified proteins with highest mean condition (left) and lowest mean condition (bottom) among experimental groups at different time points at statistically significant level (P < 0.05). Relative abundance levels of the proteins with highest mean condition, compared to the proteins with lowest mean condition, are indicated after the slash (/). Time points are indicated with underline, italic and italic + underline, for 1 h, 4 h and 48 h time points, respectively. Asterisk (*) indicates the proteins, of which, isoforms are detectable (see Additional file for the accession numbers of the isoforms). Abbreviations; c. e.: conjugating enzyme, 6-p-2-k-f-2-6-b-f; 6 phosphofructo 2 kinase fructose 2 6 bisphosphatase 3 Fragment, m-1-h; member 1 homolog, U-p-C19orf71-h; Uncharacterized protein C19orf71 homolog, P-g-s-p-d; Phosphatidylinositol glycan specific phospholipase D