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Table 1 Results of Nested-PCRs and cultures on eye swabs from healthy and diseased tortoises and turtles

From: Conjunctival flora of clinically normal and diseased turtles and tortoises

Sample

Species

Tortoise

Turtle

Clinical signs

Chlamydia PCR

Mycoplasma PCR

Gram positive isolates*

Gram negative isolates §

Candida spp.

A

B

C

D

E

F

G

H

I

J

K

L

M

N

O

P

Q

R

S

T

U

V

 

1

T. graeca

X

 

None

  

+

 

+

                    

10

T. graeca

X

 

Conjunctivitis

+

 

+

      

+

               

11

T. hosfieldi

X

 

Conjunctivitis

 

+

       

+

               

13

T. graeca

X

 

None

     

+

            

+

      

14

T. hermanni

X

 

Conjunctivitis

  

+

      

+

               

15

T. graeca

X

 

None

 

+

+

                     

+

16

T. graeca

X

 

None

  

+

      

+

              

+

17

T. graeca

X

 

None

  

+

      

+

               

18

T. graeca

X

 

Weakeness

 

+

+

+

     

+

               

19

T. hermanni

X

 

None

  

+

     

+

   

+

            

20

T. hermanni

X

 

None

  

+

     

+

   

+

         

+

  

21

T. hermanni

X

 

None

  

+

     

+

                

22

T. hermanni

X

 

None

  

+

     

+

           

+

+

   

24

T. graeca

X

 

None

        

+

       

+

        

25

T. marginata

X

 

None

  

+

      

+

               

26

T. hermanni

X

 

None

         

+

    

+

          

33

T. hermanni

X

 

None

  

+

      

+

               

34

T. hermanni

X

 

None

         

+

               

2

T. scripta

 

X

None

 

+

                   

+

   

3

T. scripta

 

X

None

                     

+

   

4

T. scripta

 

X

None

 

+

                   

+

   

5

P. subrufa

 

X

None

 

+

        

+

              

6

E. subglobosa

 

X

None

 

+

        

+

+

             

7

T. scripta

 

X

None

              

+

          

8

T. scripta

 

X

None

              

+

      

+

   

9

T. scripta

 

X

None

               

+

       

+

 

12

T. scripta

 

X

None

          

+

              

23

T. scripta

 

X

Conjunctivitis

      

+

      

+

           

27

T. scripta

 

X

None

       

+

         

+

       

28

T. scripta

 

X

None

                     

+

   

29

T. scripta

 

X

None

                   

+

     

30

T. scripta

 

X

None

 

+

        

+

+

             

31

T. scripta

 

X

None

          

+

              

32

Pseudemys spp.

 

X

None

                  

+

      
  1. *Gram positive isolates: A=Bacillus spp.; B=Kocuria varians/rosea; C=Staphylococcus aureus; D=Staphylococcus auricularis; E=Staphylococcus haemolyticus; F=Staphylococcus lentus; G=Staphylococcus sciuri; H=Staphylococcus xylosus.
  2. §Gram negative isolates: I=Aeromonas hydrophila/caviae; J=Citrobacter freundii; K=Enterobacter cloacae; L=Morganella morganii; M=Ochrobactrum anthropic; N=Pasteurella multocida; O=Pasteurella pneumotropica/ haemolytica; P=Proteus spp.; Q=Pseudomonas luteola; R=Pseudomonas putida; S=Salmonella enterica ssp. arizonae; T=Sphingomonas paucimobilis; U=Stenotrophomonas maltophilia; V=Vibrio parahaemolyticus.