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Table 3 Primer sequences used for RT-qPCR validation procedure

From: Increased hypoxia-inducible factor 1α expression in lung cells of horses with recurrent airway obstruction

Genes

Equine accession number

Primers sequence

Product size (bp)

  

5′--------------------------------- > 3′

 

Targets

Hif1-α

LOC100061166

Forward

ctcaaatgcaagaacctgctc

108

Reverse

ttccataccatcttttgtcactg

VEGF-α

NM_001081821

Forward

tggcagaaggagagcataaaa

123

Reverse

actcgatctcatcggggtact

IL-8

NM_001083951

Forward

aatgagagcgattgagagtgg

127

Reverse

caaaaacgcctgcacaataat

TNF-α

EU438779

Forward

agcctcttctccttcctcctt

123

Reverse

cagagggttgattgactggaa

Housekeeping gene

ACTB

NM_001081838.1

Forward

ggacctgacggactacctc

81

 

Reverse

cacgcacgatttccctctc

GAPDH

NM_001163856

Forward

atctgacctgccgcctggag

70

Reverse

cgatgcctgcttcaccaccttc

HPRT

XM_001490189.2

Forward

aattatggacaggactgaacgg

121

Reverse

ataatccagcaggtcagcaaag

RPL32

None

Forward

gggagcaataagaaaacgaagc

113

Reverse

cttggaggagacattgtgagc

SDHA

XM_001490889.3

Forward

gaggaatggtctggaatactg

91

Reverse

gcctctgctccataaatcg