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Table 3 Effect delivery method on the expression of genes in calf lung and jejunum tissue. Table highlights expression levels of genes in ECS delivered calves relative to the TV delivered controls

From: Birth delivery method affects expression of immune genes in lung and jejunum tissue of neonatal beef calves

Symbol

Gene annotation

Fold changea

P value2

Lung Tissue

LAP

Lingual antimicrobial peptide

−2.06

0.0075

SP-A

Surfactant protein A

−1.33

0.2890

SP-B

Surfactant protein B

−1.20

0.5915

SP-C

Surfactant protein C

−1.29

0.2616

SP-D

Surfactant protein D

1.47

0.2065

SCN11A

Sodium voltage-gated channel alpha subunit 11 alpha

−2.73

0.0002

SCN11B

Sodium voltage-gated channel beta subunit 11 beta

−1.72

0.0051

SGK1

Serine/threonine-protein kinase 1

1.29

0.8690

MUC5AC

Mucin 5 subtype AC

2.55

0.0021

MUC5B

Mucin 5B

−2.07

0.6330

ABCA3

Bovine ATP-binding cassette sub-family A member 3

−1.31

0.4254

CYP1A1

Cytochrome P450 family 1 subfamily A member 1

−3.95

0.0016

CYP1A2

Cytochrome p450 family 1 subfamily 1 member 2

−1.42

0.2811

Jejunum Tissue

IL-6

Interleukin 6

1.23

0.0018

IL-4

Interleukin 4

1.77

0.162

IL1-β

Interleukin 1 beta

1.92

0.0013

FCGRT

FC fragment of Ig receptor and transporter

1.24

0.1643

MYO5B

Myosin 5B

−1.41

0.2863

VIP

Vasoactive intestinal polypeptide

1.08

0.6519

MUC1

Mucin 1

−1.76

0.6519

MUC2

Mucin 2

−1.80

0.1456

TNFα

Tumour necrosis factor alpha

1.92

0.001

B2M

Beta-2-microglobulin

1.28

0.3555

NR3C1

Nuclear receptor subfamily 3 group C member 1

−1.05

0.1001

Rab11a

Ras related protein Rab11a

1.38

0.4954

Rab25

Ras related protein Rab25

1.02

0.3995

STX3

Syntaxin 3

−1.08

0.3794

pIg

Polymeric Immunoglobulin receptor

1.13

0.6741

  1. P values in bold indicate significant change to the transcriptional levels of the gene
  2. 2 P values were corrected (Bonferroni correction)
  3. aFold change represents observed reduction or increase in abundance of gene in CS delivered calves