Table 2 CoV and PMV positive samples for which a sequence is available
From: Coronavirus and paramyxovirus in bats from Northwest Italy
Species | ID | Sample type | Capture date | Site | Settinga | Sex/ageb | CoV sequence (AN)/CoV genus | PMV sequence (AN) |
|---|---|---|---|---|---|---|---|---|
Myotis nattereri | 560 | Feces | 31/08/13 | CN1 | T roost | M/ad | Mnat560_IT_13 (KY780381)/alpha | Â |
562 | Urine | F/juv | Mnat562_IT_13 (KY780382)/alpha | Â | ||||
1021 | Feces | 16/08/14 | TO7 | R roost | F/juv | Mnat1021_IT_14 (KY780387)/alpha | Â | |
Pipistrellus pipistrellus | 1015 | Urine | 05/08/14 | VC8 | R roost | F/ad | Ppip1015C_IT_14 (KY780385)/alpha | Ppip1015P_IT_14 (KY780403) |
1016 | Feces | F/juv | Ppip1016_IT_14 (KY780386)/alpha | Â | ||||
1000 | Feces | 11/08/14 | VC9 | Fora-ging | M/ad | Ppip1000_IT_14 (KY780384)/alpha | Â | |
Pipistrellus kuhlii | 600 | Feces | 19/08/14 | CN2 | R roost | F/ad | Â | Pkuh600_IT_14 (KY780401) |
605 | Feces | F/ad | Pkuh605_IT_14 (KY780383)/alpha | Â | ||||
621 | Urine | 06/08/14 | AL10 | R roost | F/ad | Â | Pkuh621_IT_14 (KY780402) | |
Myotis myotis | 4658 | Feces | 15/08/16 | CN4 | R roost | Â | Mmyo4658_IT_16 (KY780397)/alpha | Â |
4663 | Feces | Mmyo4663_IT_16 (KY780398)/alpha | Â | |||||
Myotis oxygnathus | 4235 | Feces | 06/07/16 | SV12 | R roost | Â | Moxy4235_IT_16 (KY780395)/alpha | Â |
Plecotus auritus | 4241 | Feces | 20/09/16 | CN5 | Swar-ming | M/ad | Paur4241_IT_16 (KY780396)/beta | Â |
Rhinolophus ferrumequinum | 4009 | Feces | 04/07/16 | CN6 | R roost | Â | Rfer4009_IT_16 (KY780388)/alpha | Â |
4011 | Feces | Â | Rfer4011_IT_16 (KY780389)/alpha | Â | ||||
4015 | Feces | Â | Rfer4015_IT_16 (KY780390)/alpha | Â | ||||
4019 | Feces | Â | Rfer4019_IT_16 (KY780391)/beta | Â | ||||
4024 | Feces | Â | Rfer4024_IT_16 (KY780392)/alpha | Â | ||||
4025 | Feces | Â | Rfer4025_IT_16 (KY780393)/alpha | Â | ||||
4027 | Feces | Â | Rfer4027_IT_16 (KY780394)/beta | Â | ||||
4674 | Feces | 13/07/16 | AL11 | R roost | Â | Rfer4674_IT_16 (KY780399)/beta | Â | |
4675 | Feces | Â | Rfer4675_IT_16 (KY780400)/beta | Â |