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Table 4 Primers used in the present study

From: Iron-regulated gene ireA in avian pathogenic Escherichia coli participates in adhesion and stress-resistance

Primers

Primer sequence (5′–3′)

Gene

Reference

ireA-F

AGATACGCTTGTTGTTAC

ireA

This study

ireA-R

CATTCCATGCTGCTAC

  

ireAMu-F

GTAAATTCCCTCTTTGCTAACGCAAATCATTATCATTACGCCTTTGGCAAAGGGAAATTTGTGTAGGCTGGAGCTGCTTCGA

Upstream region of ireA

This study

ireAMu-R

CATTACTGATTACTACACTGGTACCTGAGGCTCACGGCCTCAGGTTGTCTTTATATACTCCATATGAATATCCTCCTTAG

Downstream region of ireA

 

ireA-1

TACTCCCCATCCCCGGGCAA

ireA

This study

ireA-2

GGGGGCAGCAATATCCGGTG

  

k1

CAGTCATAGCCGAATAGCCT

kanR

[27]

k2

CGGTGCCCTGAATGAACTGC

ireACo-F

TACGGATCCCTGAACAATAGCGAT

ireA

This study

ireACo-R

GCTAAGCTTTTACAACCTGGAAAC

  

QireA-F

AAACATGGGATGGCGTACTT

ireA

This study

QireA-R

AATCAATGGGCCTGACAGATAG

  

QFeoB-F

GCACTCTTTGTGCATGGTATTC

FeoB

This study

QFeoB-R

TGGCAGCACGGTGTTAAT

  

QfepA-F

CAATGCGCCAGAACATAAAGAG

fepA

This study

QfepA-R

TGTCGAGGTTGCCATACAAG

  

QfepC-F

TCGTTACGCCAGCCATTT

fepC

This study

QfepC-R

TGCAGCGCAGACCATAAA

  

QfyuA-F

ATGCCTATGTGGGATGGAATG

fyuA

This study

QfyuA-R

CCAGTCATCGGTGGTGTATTT

  

Qirp1-F

GGCGAACCCTGCTATGTATT

irp1

This study

Qirp1-R

GTCCATGCAGTACCAGCTAAA

  

Qirp2-F

GCGGCTGATTACCAACAATTAC

irp2

This study

Qirp2-R

CTGGATCAGGTTGCTCTCTTC

  

QChuA-F

TAGGCCACATCAAGGCTAAAC

ChuA

This study

QChuA-R

CGGCGACAACTATGTCGTATAA

  

QdnaE-F

ATGTCGGAGGCGTAAGGCT

dnaE

This study

QdnaE-R

TCCAGGGCGTCAGTAAACAA

  

P1

TTGCCGGAATTCTCAGGGGGCCA

GTCTACTGAATGAG

fusion ireA

This study

P2

ACCGTCGTCGACTTAGTGATGATGATGAT

GATGAGAACCATACAGGGAAGACATAGGG

  

QyfcO-F

TGCATAACTCGTCATGTCCTGTCTCCGTTG

yfcO

This study

QyfcO-R

AGCGTTTTCTCAATCGTTCCGCCCGTC

  

QyfcQ-F

CCTGCATTTCTACGGCAATTTAC

yfcQ

This study

QyfcQ-R

CGGTCACCATCAGGTCTTTAC

  

QaufG-F

TGCTCTGGCAACATCAGTAG

aufG

This study

QaufG-R

ACTAACAGGTAAAGTCAGGAAAGT

  

QfmlD-F

CAGGCTCCCTACAGTCATATAAAG

fmlD

This study

QfmlD-R

TCGGTGTCTTATCACCAATATCC

  

QfmlE-F

CAGTGCCAGACAATTTCCAAC

fmlE

This study

QfmlE-R

CCGTTAAATGCAACCTGAACTC

  

QyadN-F

CCACTGTTAATGGCGGTGTA

yadN

This study

QyadN-R

TTTAGCCAGGCGAGAAGAAC

  

QfimH-F

CTTATGGCGGCGTGTTATCT

fimH

This study

QfimH-R

CGGCTTATCCGTTCTCGAATTA