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Fig. 2 | BMC Veterinary Research

Fig. 2

From: Genome-wide association study reveals a locus for nasal carriage of Staphylococcus aureus in Danish crossbred pigs

Fig. 2

Manhattan plots for GWAS of nasal Staphylococcus aureus carriage in Danish crossbred pigs. The analysis included 65 non-carriers and 56 persistent carriers which were genotyped at 23,919 autosomal SNPs. p-values were corrected using lambda statistic to account for genetic confounding. Upper figure shows raw p-values; a suggestive significance threshold (p = 1 ×10−5 is indicated with a horizontal line. Lower figure shows permuted dataset after 10,000 permutations; the horizontal line shows the genome-wide significance threshold (p = 0.05)

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