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Table 3 Genes analyzed by qRT-PCR

From: The early immune response to infection of chickens with Infectious Bronchitis Virus (IBV) in susceptible and resistant birds

Gene

Description

Fold change

GenBank

Ensembl

MX1

Interferon-induced GTP-binding protein Mx

6–20

NM_204609

ENSGALG00000016142

C1S

complement component 1, s subcomponent

2–4

NM_001030777

ENSGALG00000014603

IRF7

Interferon regulatory factor 7 (IRF-7)

4–5

NM_205372

ENSGALG00000014297

TLR3

Toll-like receptor 3

4

NM_001011691

ENSGALG00000013468

CCLi7

Chemokine ah221

2–12

AY037860

ENSGALG00000002343

CD38

ADP-ribosyl cyclase 1

4–9

XM_420774

ENSGALG00000014508

FKBP5

FK-506 binding protein 51

5–6

NM_001005431

ENSGALG00000000947

IGFBP5

Insulin-like growth factor binding protein 5

1

XM_422069

ENSGALG00000011468

DDT

D-dopachrome tautomerase

2–3

NM_001030667

ENSGALG00000006350

SRI

sorcin

2

NM_001080865

ENSGALG00000008985

CLU

clusterin

2

NM_204900

ENSGALG00000016587

COX11

Cytochrome c oxidase assembly protein COX11, mitochondrial precursor

2

XM_001233972

ENSGALG00000003017

MMD2

Monocyte to macrophage differentiation factor 2

2

XM_414787

ENSGALG00000004530

IFNAR2

interferon alpha/beta receptor 2

2–3

NM_204858

ENSGALG00000015938

TNFAIP1

tumor necrosis factor, alpha-induced protein 1 (endothelial)

2

NM_001030726

ENSGALG00000005715

MAP4K4

mitogen-activated protein kinase kinase kinase kinase 4

2

NM_001031126

ENSGALG00000008970

MAFK

Transcription factor MafK.

2

NM_204756

ENSGALG00000004189

CCL13

similar to Small inducible cytokine A13 precursor (CCL13)

3

XM_415779

ENSGALG00000024470

TPD52L1

Tumor protein D53 homolog

13–23

NM_204215

ENSGALG00000014843

HSCB

Co-chaperone protein HscB, mitochondrial precursor (Hsc20)

2

XR_026662

ENSGALG00000005706

SUCLG2

succinate-CoA ligase, GDP-forming, beta subunit

2

NM_001006141

ENSGALG00000007652