BMC Veterinary Research

Table 1 Genotypic characterization employing MluI-RFLP and MLST of isolated Borrelia strains isolated from lung and heart specimens of different rodents

From: Detection, identification and genotyping of Borrellia spp. in rodents in Slovenia by PCR and culture

Rodent genus and species	Lung		Heart
Rodent genus and species	MluI-RFLP	MLST ST	RFLP	MLST ST
Apodemus flavicollis	culture negative		B. afzelii Mla1	335
Apodemus flavicollis	culture negative		B. afzelii Mla1	335
Apodemus flavicollis	culture negative		B. afzelii Mla1	335
Apodemus flavicollis	culture negative		B. afzelii Mla1	335
Myodes glareolus	B. afzelii Mla1	549^a	B. afzelii Mla1	549^a
Myodes glareolus	culture negative		B. afzelii Mla1	549^a
Myodes glareolus	culture negative		B. afzelii Mla1	342
Myodes glareolus	culture negative		B. afzelii Mla1	550^a
Myodes glareolus	culture negative		B. afzelii Mla1	215
Myodes glareolus	B. afzelii Mla1	335	culture negative
Myodes glareolus	culture negative		B. afzelii Mla1	335

^anew ST
MluI-LRFP - Large restriction fragment pattern after MluI digestion on whole genom
MLST – multilocus sequence typing
ST – sequence type

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ISSN: 1746-6148

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