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Table 1 RNA-Seq and RT-qPCR results for expression of exFeLV and enFeLV virus specific regions

From: Decreased expression of endogenous feline leukemia virus in cat lymphomas: a case control study

Condition

Cat

No. of reads mapped to specific regions (MAPQ  >  20)

RT-qPCR

exFeLV probe

enFeLV probe

enFeLV

GAPDH

enFeLV/ 1.00 × 10 6 GAPDH

exFeLV

control

A

0

24

7.09 × 107

1.04 × 108

6.78 × 105

Not detected

B

0

83

1.72 × 108

3.43 × 108

5.01 × 105

Not detected

C

0

32

NA

NA

NA

NA

tumor

D

0

4

9.52 × 106

1.37 × 109

6.97 × 103

Not detected

E

0

11

1.25 × 108

5.33 × 108

2.34 × 105

Not detected

F

0

16

1.56 × 108

7.61 × 108

2.05 × 105

Not detected

G

0

16

1.24 × 108

9.78 × 108

1.27 × 105

Not detected

H

0

27

7.92 × 107

1.22 × 109

6.49 × 104

Not detected