Table 6 Hunter-Gaston diversity index for MLVA-16 loci of the global collection of Brucella abortus biovar 1 genotypes from Europe, North, Central and South America, Africa and Indonesia
Locus (panel) | No. of alleles | No. of repeats | D value (95% confidence interval) |
|---|---|---|---|
Bruce06 (1) | 2 | 3, 4 | 0.327 (0.193-0.460) |
Bruce08 (1) | 2 | 5, 6 | 0.115 (0.000-0.231) |
Bruce11 (1) | 1 | 4 | 0.000 (0.000-0.132) |
Bruce12 (1) | 2 | 12, 13 | 0.040 (0.000-0.115) |
Bruce42 (1) | 2 | 1, 2 | 0.444 (0.351-0.537) |
Bruce43 (1) | 2 | 2, 3 | 0.350 (0.222-0.479) |
Bruce45 (1) | 1 | 3 | 0.000 (0.000-0.132) |
Bruce55 (1) | 2 | 1, 3 | 0.040 (0.000-0.115) |
Bruce18 (2A) | 3 | 4, 5, 6 | 0.079 (0.000-0.181) |
Bruce19 (2A) | 1 | 42 | 0.115 (0.000-0.231) |
Bruce21 (2A) | 2 | 6, 8 | 0.040 (0.000-0.115) |
Bruce04 (2B) | 3 | 3, 4, 5 | 0.496 (0.362-0.629) |
Bruce07 (2B) | 4 | 4, 5, 6, 7 | 0.433 (0.279-0.588) |
Bruce09 (2B) | 1 | 3 | 0.000 (0.000-0.132) |
Bruce16 (2B) | 6 | 0, 2, 3, 4, 6, 8 | 0.729 (0.654-0.804) |
Bruce30 (2B) | 5 | 0, 4, 5, 6, 8 | 0.707 (0.654-0.760) |