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Figure 3 | BMC Veterinary Research

Figure 3

From: Discovery and partial characterization of a non-LTR retrotransposon that may be associated with abdominal segment deformity disease (ASDD) in the whiteleg shrimp Penaeus (Litopenaeus) vannamei

Figure 3

Alignment of reverse transcriptase (RT) protein sequences. Protein alignments of non-LTR retrotransposon clade I and RTE based on the reverse transcriptase (RT) sequence of the partial sequence of the reverse transcriptase domains 4–5 of Idt (M28878), Idm (M14954), BGR (X60372), BgI (EF413180.2), SM67625701 (CAJ00236), BDDFcow (M63452), RTE1 (AF025462), RTE2 (U58755), Pm82409002 (ABB73282), LSNONLTR1 (EU180975), LSNONLTR3 (EU180976), (LvEST40956221 (CK570639), LvGENAY466169 (AY466169) and LvGENAY466256 (AY466256). The numbers above the boxes indicate the domain. Amino acid similarity is represented with grey shading while identity is represented with black shading.

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