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Table 1 Primer-specific sequences, annealing temperatures and base pair length for housekeeping genes, cytokines, acute-phase proteins and heat shock protein

From: Evaluation of immune and stress status in harbour porpoises (Phocoena phocoena): can hormones and mRNA expression levels serve as indicators to assess stress?

Cellmediators/mol. biomarkers

 

Primer sequences (5′–3′)

Annealing temperature

Base pair length

YWHAZ

S

AGA CGG AAG GTG CTG AGA AA

58°C

208

 

AS

TCA TVA CCA GCA GCA ACT TC

  

GAPDH

S

GCC AAA AGG GTC ATC ATC TC

57°C

201

 

AS

GGG GCC ATC CAC AGT CTT CT

  

IL-10

S

CCT GGG TTG CCA AGC CCT GTC

62°C

208

 

AS

ATG CGC TCT TCA CCT GCT CC

  

TNFα

S

GGC TGA ACA CAT ATG CCA AC

57°C

111

 

AS

TGA AGA GGA CCT GGG AGT AGA

  

HP

S

CTG GCA GGC TAA GAT GGT TT

54°C

75

 

AS

GTC AGC AGC CAT TGT TCA TT

  

CRP

S

TTC TCG TAT GCC ACC AAG AG

54°C

192

 

AS

TTC AGA CCC ACC CAC TGT AA

  

HSP 70

S

GGG GCT GAA CGT GCT GAG G

62°C

280

 

AS

CCG CTT GTT CTG GCT GAT GTC