From: SNR analysis: molecular investigation of an anthrax epidemic
 | LOCUS | PRIMER SEQUENCE (5' to 3') | CONCENTRATION μM |
---|---|---|---|
MLVA 25 | Â | Â | Â |
 | CG3 | F:CY5.5-TGTCGTTTTACTTCTCTCTCCAATAC R:AGTCATTGTTCTGTATAAAGGGCAT | 0.30 |
 | bams44 | F: CY5.5-GCACTTGAATATTTGGCGGTAT R: GCGAATTAATTGCTCCTCAAAT | 0.30 |
 | bams3 | F: CY5.5-GCAGCAACAGAAAACTTCTCTCCAATAACA R:TCCTCCCTGAGAACTGCTATCACCTTTAAC | 0.30 |
Multiplex A | vrrB2 | F: D2-CACAGGCTATTCTTTATCAAACTCATC R: CCCAAGGTGAAGATTGTTGTTGA | 0.15 |
 | bams5 | F: D2-GCAGGAAGAACAAAAGAAACTAGAAGAGCA R: ATTATTAGCAGGGGCCTCTCCTGCATTACC | 0.30 |
 | bams15 | F: D2-GTATTTCCCCCAGATACAGTAATCC R: GTGTACATGTTGATTCATGCTGTTT | 0.60 |
 | bams1 | F: CY5-GTTGAGCATGAGAGGTACCTTGTCCTTTTT R: AGTTCAAGCGCCAGAAGGTTATGAGTTATC | 0.15 |
 | vrrC1 | F: CY5-GAAGCAAGAAAGTGATGTAGTGGAC R: CATTTCCTCAAGTGCTACAGGTTC | 0.30 |
 | bams13 | F: CY5.5-AATTGAGAAATTGCTGTACCAAACT R: CTAGTGCATTTGACCCTAATCTTGT | 0.30 |
 | vrrB1 | F: CY5--ATAGGTGGTTTTCCGCAAGTT R: GATGAGTTTGATAAAGAATAGCCTGTG | 0.10 |
Multiplex B | bams28 | F: CY5-CTCTGTTGTAACAAAATTTCCGTCT R: TATTAAACCAGGCGTTACTTACAGC | 0.15 |
 | vrrC2 | F: CY5-CCAGAAGAAGTGGAACCTGTAGCAC R: GTCTTTCCATTAATCGCGCTCTATC | 0.10 |
 | bams53 | F: D2-GAGGTGTGTTAGGTGGGCTTAC R: CATATTTTCACCTTAATTTTGGAAG | 0.60 |
 | bams31 | F: D2-GCTGTATTTATCGAGCTTCAAAATCT R: GGAGTACTGTTTGTTGAATGTTGTTT | 0.60 |
 | vrrA | F: CY5.5-CACAACTACCACCGATGGCACA R: GCGCGTTTCGTTTGATTCATAC | 0.06 |
 | bams25 | F: CY5.5-CCGAATACGTAAGAAATAAATCCAC R: TGAAAGATCTTGAAAAACAAGCATT | 0.15 |
Multiplex C | bams21 | F: CY5.5-TGTAGTGCCAGATTTGTCTTCTGTA R: CAAATTTTGAGATGGGAGTTTTACT | 0.30 |
 | bams34 | F: D2-TGTGCTAAATCATCTTGCTTGG R: CAGCAAAATCAATCGAATCAAA | 0.30 |
 | bams24 | F: CY5-CTTCTACTTCCGTACTTGAAATTGG R: CGTCACGTACCATTTAATGTTGTTA | 0.30 |
 | bams51 | F: CY5-ATTTCCTGAAGCAGGTTGTGTT R: TGCATCTAACAATGCAGAACAA | 0.60 |
 | bams22 | F: CY5-ATCAAAAATTCTTGGCAGACTGA R: ACCGTTAATTCACGTTTAGCAGA | 0.15 |
Multiplex D | bams23 | F: D2-CGGTCTGTCTCTATTATTCAGTGGT R: CCTGTTGCTCCTAGTGATTTCTTAC | 0.30 |
 | bams30 | F: CY5.5-AGCTAATCACCTACAACACCTGGTA R: CAGAAAATATTGGACCTACCTTCC | 0.30 |
 | pXO1 | F: CY5-CAATTTATTAACGATCAGATTAAGTTCA R: TCTAGAATTAGTTGCTTCATAATGGC | 0.15 |
 | pXO2 | F: CY5.5-TCATCCTCTTTTAAGTCTTGGGT R: GTGTGATGAACTCCGACGACA | 0.15 |
STR-MTD | Â | Â | Â |
Singleplex A | CL33 | F: 6FAM-TGGGGTATATTCCCATCGAA R:CCGCAGATACCAACCAACAT | 0.2 |
Singleplex B | CL12 | F: 6FAM-AAGCCAGGTGCAAAAACAGT R: TCTCACTGTGCCTCGCTAAA | 0.2 |
Singleplex C | CL1 | F: 6FAM-TTCTCGGAGATGATTTTCGG R:CTCCCATTTTACATCCCCCT | 0.2 |
Singleplex D | CL37 | F: NED-CTCCGCAATTTTCAAACGAT R: CCGCCGGCATAAAGATAGTA | 0.2 |
KEN-MTD | Â | Â | Â |
 | CL33 HM1 | F: PET GAAAACTTTGCAACCGACC R: GTCGAACGTGTTCTAGCTACAG | 0.2 |
Multiplex I | CL10 HM6 | F: 6FAM-TAAAAAGACAGAATTTTCAATTTTATCAACAAC R: GTGGAAACTAATGTGAGTTATATATGTTAGTTAAG | 0.2 |
 | CL12 HM2 | F: VIC-GCTATTCTCACTGTGCCTCG R: GTTAAAACGAAGTAAAGAAAAGTGGG | 0.2 |
 | CL35 HM13 | F: NED-GGATTGCTTAAGGTATATAATGGATTT R: GTTGTGTTCCATATGTATCCCTCC | 0.1 |