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Table 1 List of tandem repeats investigated

From: Evaluation of tandem repeats for MLVA typing of Streptococcus uberis isolated from bovine mastitis

Tandem repeat (TR)

Repeat length (bp)

Copy number in 0104J genome

Percent* matches

Location in 0140J genome

TR 01

18

2.2

86

26862–26900

TR 02

12

5.5

72

26850–26909

TR 03

124

3.2

98

38018–38419

TR 04

32

2.0

93

73534–73597

TR 05

18

2.2

86

79094–79132

TR 06

129

2.2

89

167675–167961

TR 07

129

2.4

86

167708–168016

TR 08

29

2.2

100

242079–242143

TR 09

29

2.4

80

281367–281436

TR 10

50

4.0

95

423156–423356

TR 11

208

2.0

96

591209–591624

TR 12

163

2.0

93

591626–591951

TR 13

21

2.0

100

654394–654434

TR 14

28

2.1

93

902276–902335

TR 15

128

2.0

94

992075–992330

TR 16

18

3.3

90

1066925–1066983

TR 17

27

2.9

80

1067084–1067161

TR 18

125

3.0

97

1136470–1136844

TR 19

16

2.0

93

1147017–1147048

TR 20

129

3.0

97

1209337–1209723

TR 21

31

2.0

97

1240441–1240502

TR 22

12

2.5

94

1345878–1345907

TR 23

12

2.5

88

1494746–1494775

TR 24

13

2.0

100

1496960–1496985

TR 25

15

3.9

93

1813855–1813913

  1. * percent of matches between adjacent copies.