Table 3 Indicator operational taxon units (OTUs) and their relative abundance (%) for liquid-fed (n = 13) or conventionally-fed (n = 7) pigs
Group | Indicator (Phylum/Class/Order/Family/Genus) |
|---|---|
Liquid | Proteobacteria/Gammaproteobacteria/Pseudomonales/Moraxellaceae/Acinetobacter (3.8%) |
Firmicutes/Bacilli/Lactobacillales/Leuconostoaceae/Leuconostoc (0.44%) | |
Firmicutes/Bacilli/Lactobacillales/Lactobacillaceae/Lactobacillus (2 OTUs) (0.33%) | |
Firmicutes/Bacilli/Lactobacillales/Aerococcaceae/Aerococcus (0.3%) | |
Proteobacteria/Gammaproteobacteria/Pseudomonadales/Pseudomonadaceae/Pseudomonas (11.7%) | |
Proteobacteria/Betaproteobacteria/Burkholderiales/Oxalobacteraceae/Janthinobacterium (3.8%) | |
Spirochaetes/Spirochaetes/Spirochaetales/Spirochaetaceae/Treponema (0.11%) | |
Conventional | Proteobacteria/Gammaproteobacteria/Pseudomonales/Moraxellaceae/Moraxella (4 OTUs) (0.019%) |
Firmicutes/Bacilli/Lactobacillales/Lactobacillaceae/Lactobacillus (0.077%) | |
Proteobacteria/Gammaproteobacteria/Pseudomonadales/Pseudomonadaceae/Pseudomonas (0.027%) | |
Proteobacteria/Unclassified (2 OTUs) (0.046%) | |
Firmicutes/Bacilli/Bacillales/Staphylococcaceae/Staphylococcus (0.28%) | |
Firmicutes/Bacilli/Bacillales/Staphylococcaceae/Unclassified (0.009%) | |
Firmicutes/Clostridia/Clostridiales/Ruminococcaceae/Unclassified (0.06%) | |
Firmicutes/Unclassified (0.0035%) |